The sections and subsections of Ficus subg. Synoecia are described and their Malesian species listed and keyed out. Six new species are described or established in the subgenus: F. cavernicola, F. colobocarpa, F. jacobsii, F. jimiensis, F. sohotonensis, and F. submontana. The combination F. disticha Blume subsp. calodictya (Summerh.) C.C. Berg is made and the lectotypes for F. alococarpa Diels and F. simiae H.J.P. Winkl. are designated.